GetExplainedNodesOfCCG: Get explained nodes of CCG

In CausalR: Causal network analysis methods

Description

Returns a table of node names and values for explained nodes, I.e. nodes that appear in both network and data with the same sign. The table contain the name in column 1 and the value (1 or -1) in column 2

Usage

GetExplainedNodesOfCCG(hypothesisnode, signOfHypothesis, network,
  experimentalData, delta)

Arguments

hypothesisnode	a hypothesis node
signOfHypothesis	the direction of change of hypothesis node
network	a computational causal graph
experimentalData	The experimental data read in using ReadExperimentalData. The results is an n x 2 matrix; where the first column contains the node ids of the nodes in the network that the results refer to. The second column contains values indicating the direction of regulation in the results - (+)1 for up, -1 for down and 0 for insignificant amounts of regulation. The name of the first column is the filename the data was read from.
delta	the number of edges across which the hypothesis should be followed

Value

vector of explained nodes

CausalR documentation built on Nov. 8, 2020, 5:25 p.m.