dot-diffExpr: Compute differential expression
In CellTrails: Reconstruction, visualization and analysis of branching trajectories
Description
Usage
Arguments
Details
Value
Author(s)
Description
Computes P-value and fold-change between two expression vectors.
Usage
1
Arguments
x
Feature expression in condition x
y
Feature expression in condition y
lod
Gene limit of detection
Details
For censored data a Peto-Peto test is performed,
for non-censored data a Wilcoxon rank sum test.
If limit of detection is provided, expectation maximization
is used to compute the fold-change.
Value
A list containing the following components:
p.value
P-value
fold
Fold-change
Author(s)
Daniel C. Ellwanger
CellTrails documentation built on Nov. 8, 2020, 5:53 p.m.
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Description Usage Arguments Details Value Author(s)
Description
Computes P-value and fold-change between two expression vectors.
Usage
1 |
Arguments
x |
Feature expression in condition x |
y |
Feature expression in condition y |
lod |
Gene limit of detection |
Details
For censored data a Peto-Peto test is performed, for non-censored data a Wilcoxon rank sum test. If limit of detection is provided, expectation maximization is used to compute the fold-change.
Value
A list containing the following components:
|
P-value |
|
Fold-change |
Author(s)
Daniel C. Ellwanger
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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