CexoR: An R package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates
Version 1.14.0

Strand specific peak-pair calling in ChIP-exo replicates. The cumulative Skellam distribution function (package 'skellam') is used to detect significant normalised count differences of opposed sign at each DNA strand (peak-pairs). Irreproducible discovery rate for overlapping peak-pairs across biological replicates is estimated using the package 'idr'.

Package details

AuthorPedro Madrigal <[email protected]>
Bioconductor views Genetics Sequencing Transcription
MaintainerPedro Madrigal <[email protected]>
LicenseArtistic-2.0 | GPL-2 + file LICENSE
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:

Try the CexoR package in your browser

Any scripts or data that you put into this service are public.

CexoR documentation built on May 31, 2017, 10:56 a.m.