Files in ClusterSignificance

The ClusterSignificance package provides tools to assess if class clusters in dimensionality reduced data representations have a separation different from permuted data

README.md

NEWS

NAMESPACE

DESCRIPTION

build/vignette.rds

data/pcpMatrix.rda

data/mlpMatrix.rda

R/permutation-methods.R R/show-methods.R R/classifier-methods.R R/mlpMatrix.R R/projection-methods.R R/initialize-methods.R R/ClusterSignificance-package.R R/plot-methods.R R/All-classes.R R/pcpMatrix.R vignettes/ClusterSignificance-vignette.Rmd man/mlpMatrix.Rd man/ClusterSignificance-package.Rd man/classify.Rd man/pcpMatrix.Rd man/permute.Rd man/pcp.Rd man/mlp.Rd

man/figures/pcpCl.png

man/figures/pcpPrj.png

man/figures/pcpPerm.png

tests/testthat.R tests/testthat/test_plot-methods.R tests/testthat/test_permutation-methods.R tests/testthat/test_projection-methods.R tests/testthat/test_classifier-methods.R

inst/CITATION

inst/doc/ClusterSignificance-vignette.html

inst/doc/ClusterSignificance-vignette.Rmd inst/doc/ClusterSignificance-vignette.R inst/data-raw/demoData.R

ClusterSignificance documentation built on Nov. 8, 2020, 5:28 p.m.