setFixedPatterns-methods: set the fixed patterns for either the A or the P matrix
In CoGAPS: Coordinated Gene Activity in Pattern Sets
Description
Usage
Arguments
Value
Examples
Description
these parameters are interrelated so they must be set together
Usage
1
2
3
4
setFixedPatterns(object, fixedPatterns, whichMatrixFixed)
## S4 method for signature 'CogapsParams'
setFixedPatterns(object, fixedPatterns, whichMatrixFixed)
Arguments
object
an object of type CogapsParams
fixedPatterns
values for either the A or P matrix
whichMatrixFixed
either 'A' or 'P' indicating which matrix is fixed
Value
the modified params object
Examples
1
2
3
params <- new("CogapsParams")
data(GIST)
params <- setFixedPatterns(params, getSampleFactors(GIST.result), 'P')
CoGAPS documentation built on Nov. 8, 2020, 5:02 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
these parameters are interrelated so they must be set together
Usage
1 2 3 4 | setFixedPatterns(object, fixedPatterns, whichMatrixFixed)
## S4 method for signature 'CogapsParams'
setFixedPatterns(object, fixedPatterns, whichMatrixFixed)
|
Arguments
object |
an object of type CogapsParams |
fixedPatterns |
values for either the A or P matrix |
whichMatrixFixed |
either 'A' or 'P' indicating which matrix is fixed |
Value
the modified params object
Examples
1 2 3 | params <- new("CogapsParams")
data(GIST)
params <- setFixedPatterns(params, getSampleFactors(GIST.result), 'P')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.