Files in CoRegNet

CoRegNet : reconstruction and integrated analysis of co-regulatory networks

README.md

NAMESPACE

DESCRIPTION

build/vignette.rds

src/comblicorn.c

data/ENCODE_sub.RData

data/HIPPIE_sub.RData

data/HumanTF.RData

data/datalist

data/STRING_sub.RData

data/CHEA_sub.RData

data/HumanTF_entrezgene.RData

data/CIT_BLCA_EXP.RData

data/CIT_BLCA_Subgroup.RData

data/CIT_BLCA_CNV.RData

R/evidences.R R/display.R R/classes.R R/coRegnet.R R/netInference.R R/masterRegulators.R vignettes/CoRegNet.Rmd

vignettes/fig/PPARGLocalView.png

vignettes/fig/luminal1.png

vignettes/fig/wholeApp.png

vignettes/fig/coregnetWithEvidence.png

vignettes/fig/basal1.png

vignettes/fig/InfluenceHeatmap.png

man/refine.Rd man/HumanTF.Rd man/regulatorInfluence.Rd man/addEvidences.Rd man/display.Rd man/coregulators.Rd man/CoRegNet-class.Rd man/masterRegulator.Rd man/HumanDataExamples.Rd man/discretizeExpressionData.Rd man/summary.Rd man/regulators.Rd man/coRegnet-package.Rd man/coregnet.Rd man/hLICORN.Rd tests/runTests.R

inst/CITATION

inst/doc/CoRegNet.html

inst/doc/CoRegNet.R inst/doc/CoRegNet.Rmd

inst/www/js/cy.js

inst/www/js/jquery-1.11.1.min.js

inst/www/js/cytoscape.min.js

inst/www/js/jquery-slick/index.html

inst/www/js/jquery-slick/js/jquery.slick.2.1.js

inst/www/js/jquery-slick/css/dcslick.css

inst/www/css/style.css

inst/unitTests/test_coregnet.R

CoRegNet documentation built on Nov. 8, 2020, 5:06 p.m.