API for CompGO
An R pipeline for .bed file annotation, comparing GO term enrichment between gene sets and data visualisation
| Global functions | |
|---|---|
| PCAplot | Man page Source code |
| annotateBedFromDb | Man page Source code |
| bed.sample | Man page |
| compareZscores | Man page Source code |
| doJACCit | Source code |
| doZtrans.merge | Source code |
| doZtrans.single | Man page Source code |
| extractGOFromAnnotation | Source code |
| extractKEGGFromAnnotation | Source code |
| extractPvalTable | Source code |
| gata4 | Man page |
| getFnAnot_genome | Man page Source code |
| mef2a | Man page |
| mergeFnAnotCharts | Source code |
| nkx25 | Man page |
| p300 | Man page |
| plotDendrogram | Man page Source code |
| plotInteractive | Man page Source code |
| plotPairwise | Man page Source code |
| plotTwoGODags | Man page |
| plotZRankedDAG | Man page |
| plotZScores | Man page Source code |
| slidingJaccard | Man page Source code |
| srf | Man page |
| subOntology | Source code |
| tbx5 | Man page |
| viewKegg | Man page Source code |
| zTransformDirectory | Man page Source code |
