doZtrans.single: Z transform a single functional annotation chart from DAVID

In CompGO: An R pipeline for .bed file annotation, comparing GO term enrichment between gene sets and data visualisation

Description

Decomposes each GO term in a functional annotation chart (returned from getFnAnot_genome()) to its Z-score. These tables can be merged for clustering

Usage

doZtrans.single(x, name)

Arguments

x	The functional annotation chart to apply the transformation to
name	(optional) The name to give the Z-score column; if not supplied, name is derived from the input variable

Value

A data.frame of GO terms and Z-scores

Examples

# Load example fnAnot charts from DAVID:
data(funChart1)
zscore = doZtrans.single(funChart1)
str(zscore)

CompGO documentation built on Nov. 8, 2020, 8:22 p.m.