Description Usage Arguments Examples

Generates a scatterplot of z transformed GO terms and plots the result along with the Jaccard metric for each GO term and linear fit + correlation.

1 | ```
plotZScores(setA, setB, cutoff = NULL, plotAbs = TRUE, plotNA = FALSE, model = "lm")
``` |

`setA` |
DAVIDFunctionalAnnotationChart object to compare |

`setB` |
DAVIDFunctionalAnnotationChart object to compare |

`plotAbs` |
Whether to plot the absolute values of z-scores or the raw values |

`plotNA` |
Whether to remove NAs entirely or set all NAs to 0 |

`model` |
The model to use when plotting linear fit, default 'lm' |

`cutoff` |
If you want to apply a Benjamini corrected P-value cutoff to each list before generating Z scores, supply it here |

1 2 3 | ```
data(funChart1)
data(funChart2)
plotZScores(funChart1, funChart2)
``` |

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