molecularProfiles: molecularProfiles Generic

In CoreGx: Classes and Functions to Serve as the Basis for Other 'Gx' Packages

Description

Generic for molecularProfiles method

Usage

molecularProfiles(object, mDataType, assay, ...)

Arguments

object	The CoreSet to retrieve molecular profiles from
mDataType	character The type of molecular data
assay	character Name of the desired assay; if excluded defaults to first assay in the SummarizedExperiment for the given mDataType. Use assayNames(molecularProfiles(object, dataType) to check which assays are available for a given molecular datatype.
...	Fallthrough arguements for defining new methods

Value

a matrix of data for the given mDataType and assay

Examples

data(clevelandSmall_cSet)
molecularProfiles(clevelandSmall_cSet, "rna")

CoreGx documentation built on Nov. 8, 2020, 4:50 p.m.