Description Usage Arguments Value Examples
Calculate the gwc score between two vectors, using either a weighted spearman or pearson correlation
1 2 3 4 5 6 7 8 9 10 |
x1 |
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p1 |
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x2 |
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p2 |
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method.cor |
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nperm |
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truncate.p |
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... |
Other passed down to internal functions |
numeric
a vector of two values, the correlation and associated p-value.
1 2 3 4 5 6 7 8 | data(clevelandSmall_cSet)
x <- molecularProfiles(clevelandSmall_cSet,'rna')[,1]
y <- molecularProfiles(clevelandSmall_cSet,'rna')[,2]
x_p <- rep(0.05, times=length(x))
y_p <- rep(0.05, times=length(y))
names(x_p) <- names(x)
names(y_p) <- names(y)
gwc(x,x_p,y,y_p, nperm=100)
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