addCustomInfo: add customInfo nodes to each gate node and add...

Description Usage Arguments Value

View source: R/GatingSet2cytobank.R

Description

add customInfo nodes to each gate node and add BooleanAndGates

Usage

1
addCustomInfo(root, gs, flowEnv, cytobank.default.scale = TRUE, showHidden)

Arguments

root

the root node of the XML

gs

a GatingSet object

flowEnv

the environment that stores the information parsed by 'read.GatingML'.

cytobank.default.scale

logical flag indicating whether to use the default Cytobank asinhtGml2 settings. Currently it should be set to TRUE in order for gates to be displayed properly in Cytobank because cytobank currently does not parse the global scale settings from GatingML.

showHidden

whether to include the hidden population nodes in the output

Value

XML root node


CytoML documentation built on March 12, 2021, 2 a.m.