Man pages for DropletUtils
Utilities for Handling Single-Cell Droplet Data
| barcodeRanks | Calculate barcode ranks |
| chimericDrops | Remove chimeric molecules |
| controlAmbience | Ambient contribution from controls |
| defaultDrops | Call cells from number of UMIs |
| downsampleReads | Downsample reads in a 10X Genomics dataset |
| emptyDrops | Identify empty droplets |
| encodeSequences | Encode nucleotide sequences |
| estimateAmbience | Estimate the ambient profile |
| get10xMolInfoStats | Get 10x cell statistics |
| hashedDrops | Demultiplex cell hashing data |
| inferAmbience | Infer the ambient profile |
| makeCountMatrix | Make a count matrix |
| maximumAmbience | Maximum ambient contribution |
| read10xCounts | Load data from a 10X Genomics experiment |
| read10xMolInfo | Read the 10X molecule information file |
| reexports | Objects exported from other packages |
| removeAmbience | Remove the ambient profile |
| swappedDrops | Clean barcode-swapped droplet data |
| write10xCounts | Write count data in the 10x format |
