Man pages for DropletUtils
Utilities for Handling Single-Cell Droplet Data

barcodeRanksCalculate barcode ranks
chimericDropsRemove chimeric molecules
controlAmbienceAmbient contribution from controls
defaultDropsCall cells from number of UMIs
downsampleReadsDownsample reads in a 10X Genomics dataset
emptyDropsIdentify empty droplets
encodeSequencesEncode nucleotide sequences
estimateAmbienceEstimate the ambient profile
get10xMolInfoStatsGet 10x cell statistics
hashedDropsDemultiplex cell hashing data
inferAmbienceInfer the ambient profile
makeCountMatrixMake a count matrix
maximumAmbienceMaximum ambient contribution
read10xCountsLoad data from a 10X Genomics experiment
read10xMolInfoRead the 10X molecule information file
reexportsObjects exported from other packages
removeAmbienceRemove the ambient profile
swappedDropsClean barcode-swapped droplet data
write10xCountsWrite count data in the 10x format
DropletUtils documentation built on Feb. 4, 2021, 2:01 a.m.