Files in EWCE

Expression Weighted Celltype Enrichment

DESCRIPTION

NAMESPACE

R

R/add.res.to.merging.list.R R/bootstrap.enrichment.test.R R/cell.list.dist.R R/data.R R/ewce.plot.R R/ewce_expression_data.R R/generate.bootstrap.plots.R R/merged_ewce.R R/prepare.genesize.control.network.R R/read_celltype_data.R R/subcell.list.dist.R

build

build/vignette.rds

data

data/celltype_data.rda

data/datalist

data/example_genelist.rda

data/mouse_to_human_homologs.rda

data/tt_alzh.rda

data/tt_alzh_BA36.rda

data/tt_alzh_BA44.rda

inst

inst/doc

inst/doc/EWCE.R inst/doc/EWCE.Rmd

inst/doc/EWCE.html

man

man/add.res.to.merging.list.Rd man/bootstrap.enrichment.test.Rd man/celltype_data.Rd man/ewce.plot.Rd man/ewce_expression_data.Rd man/example_genelist.Rd man/generate.bootstrap.plots.Rd man/merged_ewce.Rd man/mouse_to_human_homologs.Rd man/read_celltype_data.Rd man/tt_alzh.Rd man/tt_alzh_BA36.Rd man/tt_alzh_BA44.Rd

vignettes

vignettes/BootstrapPlots

vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____astrocytes.ependymal_.none..pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____astrocytes.ependymal_Astro1.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____astrocytes.ependymal_Astro2.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____astrocytes.ependymal_Choroid.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____astrocytes.ependymal_Epend.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____endothelial.mural_Vsmc.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____microglia_Mgl1.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____microglia_Mgl2.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____microglia_Pvm1.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____microglia_Pvm2.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____oligodendrocytes_Oligo2.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____oligodendrocytes_Oligo3.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____oligodendrocytes_Oligo6.pdf vignettes/BootstrapPlots/bootDists_LOG____VignetteGraphs____pyramidal.CA1_CA1PyrInt.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____astrocytes.ependymal_.none..pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____astrocytes.ependymal_Astro1.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____astrocytes.ependymal_Astro2.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____astrocytes.ependymal_Choroid.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____astrocytes.ependymal_Epend.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____endothelial.mural_Vsmc.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____microglia_Mgl1.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____microglia_Mgl2.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____microglia_Pvm1.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____microglia_Pvm2.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____oligodendrocytes_Oligo2.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____oligodendrocytes_Oligo3.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____oligodendrocytes_Oligo6.pdf vignettes/BootstrapPlots/bootDists____VignetteGraphs____pyramidal.CA1_CA1PyrInt.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____astrocytes.ependymal_.none..pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____astrocytes.ependymal_Astro1.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____astrocytes.ependymal_Astro2.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____astrocytes.ependymal_Choroid.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____astrocytes.ependymal_Epend.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____endothelial.mural_Vsmc.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____microglia_Mgl1.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____microglia_Mgl2.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____microglia_Pvm1.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____microglia_Pvm2.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____oligodendrocytes_Oligo2.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____oligodendrocytes_Oligo3.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____oligodendrocytes_Oligo6.pdf vignettes/BootstrapPlots/qqplot_noText____VignetteGraphs____pyramidal.CA1_CA1PyrInt.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____astrocytes.ependymal_.none..pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____astrocytes.ependymal_Astro1.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____astrocytes.ependymal_Astro2.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____astrocytes.ependymal_Choroid.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____astrocytes.ependymal_Epend.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____endothelial.mural_Vsmc.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____microglia_Mgl1.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____microglia_Mgl2.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____microglia_Pvm1.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____microglia_Pvm2.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____oligodendrocytes_Oligo2.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____oligodendrocytes_Oligo3.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____oligodendrocytes_Oligo6.pdf vignettes/BootstrapPlots/qqplot_wtGSym____VignetteGraphs____pyramidal.CA1_CA1PyrInt.pdf vignettes/EWCE.Rmd

vignettes/EWCE.bib

vignettes/EWCE_cache

vignettes/EWCE_cache/html

vignettes/EWCE_cache/html/__packages

vignettes/EWCE_cache/html/unnamed-chunk-14_4411e5f4113b952f3920425bdf252363.RData

vignettes/EWCE_cache/html/unnamed-chunk-14_4411e5f4113b952f3920425bdf252363.rdb

vignettes/EWCE_cache/html/unnamed-chunk-14_4411e5f4113b952f3920425bdf252363.rdx

vignettes/nature.csl

EWCE documentation built on May 31, 2017, 3:16 p.m.