centEpiFibFatIC.m: Reference for breast tissue
In EpiDISH: Epigenetic Dissection of Intra-Sample-Heterogeneity
Description
Usage
Format
Details
References
Description
This reference was designed for estimating fractions of epithelial
cells, fibroblasts, fat cells and total immune cells in breast tissue.
Usage
1
Format
A matrix with 491 rows and 4 columns
Details
Epi
Fib
Fat
IC
References
Zheng SC, Webster AP, Dong D, Feber A, Graham DG, Sullivan R, Jevons S, Lovat LB,
Beck S, Widschwendter M, Teschendorff AE
A novel cell-type deconvolution algorithm reveals substantial contamination by immune cells in saliva, buccal and cervix.
Epigenomics (2018) 10: 925-940.
doi:
10.2217/epi-2018-0037.
EpiDISH documentation built on Nov. 8, 2020, 6:52 p.m.
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Description Usage Format Details References
Description
This reference was designed for estimating fractions of epithelial cells, fibroblasts, fat cells and total immune cells in breast tissue.
Usage
1 |
Format
A matrix with 491 rows and 4 columns
Details
Epi
Fib
Fat
IC
References
Zheng SC, Webster AP, Dong D, Feber A, Graham DG, Sullivan R, Jevons S, Lovat LB, Beck S, Widschwendter M, Teschendorff AE A novel cell-type deconvolution algorithm reveals substantial contamination by immune cells in saliva, buccal and cervix. Epigenomics (2018) 10: 925-940. doi: 10.2217/epi-2018-0037.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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