assays-FraserDataSet-method: Returns the assay for the given name/index of the...

In FRASER: Find RAre Splicing Events in RNA-Seq Data

Description

Returns the assay for the given name/index of the FraserDataSet

Usage

## S4 method for signature 'FraserDataSet'
assays(x, withDimnames = TRUE, ...)

## S4 replacement method for signature 'FraserDataSet,SimpleList'
assays(x, withDimnames = TRUE, HDF5 = TRUE, type = NULL, ...) <- value

## S4 replacement method for signature 'FraserDataSet,list'
assays(x, withDimnames = TRUE, HDF5 = TRUE, type = NULL, ...) <- value

## S4 replacement method for signature 'FraserDataSet,DelayedMatrix'
assays(x, withDimnames = TRUE, HDF5 = TRUE, type = NULL, ...) <- value

Arguments

x	FraserDataSet
withDimnames	Passed on to SummarizedExperiment::assays()
...	Parameters passed on to SummarizedExperiment::assays()
HDF5	Logical value indicating whether the assay should be stored as a HDF5 file.
type	The psi type.
value	The new value to which the assay should be set.

Value

(Delayed) matrix.

FRASER documentation built on Feb. 3, 2021, 2:01 a.m.