getBiosample: getBiosample function
In GA4GHclient: A Bioconductor package for accessing GA4GH API data servers
Description
Usage
Arguments
Details
Value
References
See Also
Examples
Description
Get a biosample by its ID.
Usage
1
getBiosample(host, biosampleId)
Arguments
host
URL of GA4GH API data server.
biosampleId
ID of the biosample requested.
Details
This function requests GET host/datasets/biosampleId.
Value
DataFrame object.
References
See Also
Examples
1
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5
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7
host <- "http://1kgenomes.ga4gh.org/"
## Not run:
datasetId <- searchDatasets(host, nrows = 1)$id
biosampleId <- searchBiosamples(host, datasetId, nrows = 1)$id
getBiosample(host, biosampleId)
## End(Not run)
GA4GHclient documentation built on Nov. 8, 2020, 5:47 p.m.
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Description Usage Arguments Details Value References See Also Examples
Description
Get a biosample by its ID.
Usage
1 | getBiosample(host, biosampleId)
|
Arguments
host |
URL of GA4GH API data server. |
biosampleId |
ID of the biosample requested. |
Details
This function requests GET host/datasets/biosampleId.
Value
DataFrame object.
References
See Also
Examples
1 2 3 4 5 6 7 | host <- "http://1kgenomes.ga4gh.org/"
## Not run:
datasetId <- searchDatasets(host, nrows = 1)$id
biosampleId <- searchBiosamples(host, datasetId, nrows = 1)$id
getBiosample(host, biosampleId)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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