getReference: getReference function
In GA4GHclient: A Bioconductor package for accessing GA4GH API data servers
Description
Usage
Arguments
Details
Value
References
See Also
Examples
Description
Get a reference by its ID.
Usage
1
getReference(host, referenceId)
Arguments
host
URL of GA4GH API data server.
referenceId
The ID of the Reference to be retrieved.
Details
This function requests GET host/references/referenceId.
Value
DataFrame object.
References
See Also
Examples
1
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3
4
5
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7
host <- "http://1kgenomes.ga4gh.org/"
## Not run:
referenceSetId <- searchReferenceSets(host, nrows = 1)$id
referenceId <- searchReferences(host, referenceSetId, nrows = 1)$id
getReference(host, referenceId)
## End(Not run)
GA4GHclient documentation built on Nov. 8, 2020, 5:47 p.m.
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Description Usage Arguments Details Value References See Also Examples
Description
Get a reference by its ID.
Usage
1 | getReference(host, referenceId)
|
Arguments
host |
URL of GA4GH API data server. |
referenceId |
The ID of the Reference to be retrieved. |
Details
This function requests GET host/references/referenceId.
Value
DataFrame object.
References
See Also
Examples
1 2 3 4 5 6 7 | host <- "http://1kgenomes.ga4gh.org/"
## Not run:
referenceSetId <- searchReferenceSets(host, nrows = 1)$id
referenceId <- searchReferences(host, referenceSetId, nrows = 1)$id
getReference(host, referenceId)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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