GEOsearch: GEOsearch

GEOsearch is an extendable search engine for NCBI GEO (Gene Expression Omnibus). Instead of directly searching the term, GEOsearch can find all the gene names contained in the search term and search all the alias of the gene names simultaneously in GEO database. GEOsearch also provides other functions such as summarizing common biology keywords in the search results.

AuthorZhicheng Ji, Hongkai Ji
Date of publicationNone
MaintainerZhicheng Ji <zji4@jhu.edu>
LicenseGPL(>=2)
Version1.0.0

View on Bioconductor

Files in this package

GEOsearch/DESCRIPTION
GEOsearch/NAMESPACE
GEOsearch/NEWS
GEOsearch/R
GEOsearch/R/BatchDownload.R GEOsearch/R/GEOSearchUI.R GEOsearch/R/GEOsearch.R GEOsearch/R/GEOsearchterm.R GEOsearch/R/database.R GEOsearch/R/keywordfreq.R GEOsearch/R/sampledetail.R GEOsearch/R/term.R GEOsearch/R/termalias.R
GEOsearch/README.md
GEOsearch/build
GEOsearch/build/vignette.rds
GEOsearch/data
GEOsearch/data/database.rda
GEOsearch/data/term.rda
GEOsearch/inst
GEOsearch/inst/doc
GEOsearch/inst/doc/GEOsearch.R
GEOsearch/inst/doc/GEOsearch.Rnw
GEOsearch/inst/doc/GEOsearch.pdf
GEOsearch/inst/shiny
GEOsearch/inst/shiny/rsconnect
GEOsearch/inst/shiny/rsconnect/shinyapps.io
GEOsearch/inst/shiny/rsconnect/shinyapps.io/zhiji
GEOsearch/inst/shiny/rsconnect/shinyapps.io/zhiji/GEOsearch.dcf
GEOsearch/inst/shiny/server.R
GEOsearch/inst/shiny/ui.R
GEOsearch/inst/shiny/www
GEOsearch/inst/shiny/www/ajaxloaderq.gif
GEOsearch/inst/shiny/www/busy.js
GEOsearch/inst/shiny/www/style.css
GEOsearch/man
GEOsearch/man/BatchDownload.Rd GEOsearch/man/GEOSearchTerm.Rd GEOsearch/man/GEOSearchUI.Rd GEOsearch/man/GEOsearch.Rd GEOsearch/man/KeyWordFreq.Rd GEOsearch/man/SampleDetail.Rd GEOsearch/man/TermAlias.Rd GEOsearch/man/database.Rd GEOsearch/man/term.Rd
GEOsearch/vignettes
GEOsearch/vignettes/GEOsearch.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.