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tests/MAFfilter.R
In GGBase: GGBase infrastructure for genetics of gene expression package GGtools
library(GGBase)
if ("GGtools" %in% installed.packages()[,1]) {
s20 = getSS("GGtools", "20")
nsnp = ncol(smList(s20)[[1]])
s20f = MAFfilter(s20, lower=.1)
nsnp2 = ncol(smList(s20f)[[1]])
( nsnp == 119921 & nsnp2 == 46755 )
}
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GGBase documentation built on Nov. 8, 2020, 5:45 p.m.
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library(GGBase)
if ("GGtools" %in% installed.packages()[,1]) {
s20 = getSS("GGtools", "20")
nsnp = ncol(smList(s20)[[1]])
s20f = MAFfilter(s20, lower=.1)
nsnp2 = ncol(smList(s20f)[[1]])
( nsnp == 119921 & nsnp2 == 46755 )
}
Try the GGBase package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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