MSigDB.TF: MSigDB.TF
In GIGSEA: Genotype Imputed Gene Set Enrichment Analysis
Description
Usage
Format
Source
Description
Gene sets that share upstream cis-regulatory motifs which can function as
potential transcription factor binding sites.
Usage
1
Format
A list with two items:
- net
a sparse matrix, the connectivity between terms and genes,
comprising 615 TFs (column) and 12774 genes (row)
- annot
a data frame, description of terms
...
Source
software.broadinstitute.org/gsea/msigdb/collections.jsp#C3
GIGSEA documentation built on Nov. 8, 2020, 7:02 p.m.
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Description Usage Format Source
Description
Gene sets that share upstream cis-regulatory motifs which can function as potential transcription factor binding sites.
Usage
1 |
Format
A list with two items:
- net
a sparse matrix, the connectivity between terms and genes, comprising 615 TFs (column) and 12774 genes (row)
- annot
a data frame, description of terms
...
Source
software.broadinstitute.org/gsea/msigdb/collections.jsp#C3
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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