TargetScan.miRNA: TargetScan.miRNA

Description Usage Format Source

Description

Gene sets of predicted human miRNA targets were obtained from TargetScan. TargetScan groups miRNAs that have identical subsequences at positions 2 through 8 of the miRNA, i.e. the 2-7 seed region plus the 8th nucleotide, and provides predictions for each such seed motif.

Usage

1

Format

A list with two items:

net

a sparse matrix, the connectivity between terms and genes, comprising 87 miRNA seed motifs and 9861 genes

annot

a data frame, description of terms

...

Source

http://www.targetscan.org


GIGSEA documentation built on Nov. 8, 2020, 7:02 p.m.