SNP358.data: Data of 358 SNPs

In GMRP: GWAS-based Mendelian Randomization and Path Analyses

Description

SNP358.data were obtained from GWAS Meta-analyzed datasets of lipoprotein cholesterols and coronary artery disease. The data contain three numeric vectors (columns): SNPID(rsid), chromosome number (chr) and SNP position on chromosome (posit).

Usage

data("SNP358.data")

Format

A data frame with 358 observations on the following 3 variables.

rsid

a character vector

chr

a numeric vector

posit

a numeric vector

Details

These 358 SNPs were chosen by using mktable with Pv = 5x10e-08,Pc = Pd =0.979 from lpd.data and cad.data. They provide a data example for how to perform annotation analysis of SNP positions.

Value

A set of data with 358 rows(SNPs) and 3 columns(SNP ID, chromosome # and SNP position on chromosomes).

Examples

data(SNP358.data)
## maybe str(SNP358.data) ; plot(SNP358.data) ...

GMRP documentation built on Nov. 8, 2020, 5:58 p.m.