inst/doc/GOFunction.R

In GOFunction: GO-function: deriving biologcially relevant functions from statistically significant functions

### R code from vignette source 'GOFunction.Rnw'

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### code chunk number 1: Example
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library("GOFunction")
data(exampledata)
sigTerm <- GOFunction(interestGenes, refGenes, organism="org.Hs.eg.db", 
            ontology="BP", fdrmethod="BY", fdrth=0.05, ppth=0.05, pcth=0.05, 
            poth=0.05, peth=0.05, bmpSize=2000, filename="sigTerm")