API for GOTHiC
Binomial test for Hi-C data analysis

Global functions
GOTHiC Man page Source code
GOTHiChicup Man page Source code
binInteractions Source code
binomialHiC Source code
binomialHiChicup Source code
countDuplicates Source code
countDuplicatesOfRaw Source code
exportCoverage Source code
filterOutDuplicates Source code
filtered Man page
findOverlaps.circle Source code
findOverlaps.parallel Source code
fixChromosomeNames Source code
getHindIIIsitesFromHicup Source code
getRestrictionSitesFromBSgenome Source code
lymphoid_chr20_paired_filtered Man page
mapHicupToRestrictionFragment Source code
mapReadsToRestrictionSites Man page Source code
mportHicup Source code
onlyPairing Source code
pairReads Man page Source code
putRangesOnFirstCircle Source code
strandAsSignedNumber Source code
GOTHiC documentation built on Nov. 17, 2017, 11:05 a.m.