API for GOTHiC
Binomial test for Hi-C data analysis

Global functions
.binInteractions Source code
.binomialHiC Source code
.binomialHiChicup Source code
.countDuplicates Source code
.countDuplicatesOfRaw Source code
.exportCoverage Source code
.filterOutDuplicates Source code
.findOverlaps.circle Source code
.findOverlaps.parallel Source code
.fixChromosomeNames Source code
.getHindIIIsitesFromHicup Source code
.getRestrictionSitesFromBSgenome Source code
.importHicup Source code
.mapHicupToRestrictionFragment Source code
.onlyPairing Source code
.putRangesOnFirstCircle Source code
.strandAsSignedNumber Source code
GOTHiC Man page Source code
GOTHiChicup Man page Source code
filtered Man page
lymphoid_chr20_paired_filtered Man page
mapReadsToRestrictionSites Man page Source code
pairReads Man page Source code
GOTHiC documentation built on July 19, 2019, 2 a.m.