metabolomic_example: Example metabolomic dataset

In GOsummaries: Word cloud summaries of GO enrichment analysis

Description

metabolomic_example is a dataset extracted from York et al (Metabolights ID: MTBLS30), it contains a subset of 120 wild-type samples from 4 tissues: heart, skeletal muscle, liver and brain.

Details

The dataset is a list with 2 slots

1. data - metabolite concentration matrix;

2. annot - annotation data frame.

Author(s)

Raivo Kolde <[e-mail]>

References

York, B., Sagen, J. V., Tsimelzon, A., Louet, J. F., Chopra, A. R., Reineke, E. L., et al. (2013). Research resource: tissue- and pathway-specific metabolomic profiles of the steroid receptor coactivator (SRC) family. Mol Endocrinol, 27(2), 366-380.

GOsummaries documentation built on Nov. 8, 2020, 6:50 p.m.