API for Genominator
Analyze, manage and store genomic data

Global functions
$,ExpData-method Man page
ExpData Man page Source code
ExpData-class Man page
Genominator Man page
Genominator-package Man page
[,ExpData-method Man page
addPrimingWeights Man page Source code
aggregateExpData Man page Source code
applyMapped Man page Source code
checkWrite Source code
chr1_yeast Man page
collapseExpData Man page Source code
computeCoverage Man page Source code
computeDiffExpT Source code
computePrimingWeights Man page Source code
dbListFieldsAndTypes Source code
emZeroInflated Source code
fixWeights Source code
formRegionsSQL Source code
getColnames Man page Source code
getConnection Source code
getDBConnection Man page Source code
getDBFilename Man page Source code
getIndexColumns Man page Source code
getMode Man page Source code
getRegion Man page Source code
getSchema Man page Source code
getTablename Man page Source code
head,ExpData-method Man page
importFromAlignedReads Man page Source code
importToExpData Man page Source code
initialize,ExpData-method Man page
joinExpData Man page Source code
listTables Man page Source code
makeAnnoFactory Source code
makeConvolver Source code
makeDBConnectionName Source code
makeGeneRepresentation Man page Source code
makeIndexName Source code
makeRegionPlotter Source code
mergeWithAnnotation Man page Source code
plot.genominator.coverage Man page Source code
plot.genominator.goodness.of.fit Man page Source code
refreshConnection Source code
regionGoodnessOfFit Man page
regionGoodnessOfFit,ExpData-method Man page
regionGoodnessOfFit,data.frame-method Man page
regionGoodnessOfFit-methods Man page
setConnection Source code
show,ExpData-method Man page
simData Source code
splitByAnnotation Man page Source code
summarizeByAnnotation Man page Source code
summarizeExpData Man page Source code
tabularGoodnessOfFit Source code
timeAndPrint Source code
toAnnoData Source code
validAnnotation Man page Source code
writeRegionsTable Source code
yeastAnno Man page
yeastAnno.sources Man page
zNB Source code
zPois Source code
Genominator documentation built on Nov. 17, 2017, 1:14 p.m.