Files in Genominator
Analyze, manage and store genomic data

DESCRIPTION
TODO
NAMESPACE
NEWS
vignettes/Genominator.Rnw
vignettes/plotting.Rnw
vignettes/withShortRead.Rnw
build/vignette.rds
tests/testImport.R_test
tests/testGenominatorFxs.R_test
tests/runTests.R_test
tests/testGoodnessOfFit.R_test
tests/testHasOverlap.R_test
tests/testEM.R_test
tests/testDiffExp.R_test
inst/sample.db
inst/CITATION
inst/benchmark/idxTiming.R inst/doc/withShortRead.R inst/doc/plotting.R
inst/doc/plotting.Rnw
inst/doc/plotting.pdf inst/doc/withShortRead.pdf
inst/doc/withShortRead.Rnw
inst/doc/Genominator.Rnw
inst/doc/Genominator.R inst/doc/Genominator.pdf
inst/scripts/pipeline.sh
inst/scripts/reshape-marioni.pl
inst/scripts/pipeline-yeast1.sh
inst/scripts/consistency.txt
inst/scripts/pipeline-marioni.R
inst/scripts/pipeline-marioni.sh
inst/scripts/import-marioni.sh
inst/scripts/sqlimport.sh
inst/scripts/temp.R
inst/scripts/reshape-yeast1.pl
man/addPrimingWeights.Rd man/collapseExpData.Rd man/validAnnotation.Rd man/importFromAlignedReads.Rd man/splitByAnnotation.Rd man/makeGeneRepresentation.Rd man/summarizeExpData.Rd man/mergeWithAnnotation.Rd man/getRegion.Rd man/joinExpData.Rd man/plot.genominator.coverage.Rd man/plot.genominator.goodness.of.fit.Rd man/aggregateExpData.Rd man/applyMapped.Rd man/summarizeByAnnotation.Rd man/Genominator.Rd man/regionGoodnessOfFit-methods.Rd man/yeastAnno.Rd man/importToExpData.Rd man/computePrimingWeights.Rd man/ExpData.Rd man/computeCoverage.Rd
data/chr1_yeast.rda
data/yeastAnno.rda
data/yeastAnno.sources.rda
R/emZero.R R/goodnessOfFit.R R/coverage.R R/importAndManage.R R/diffExp.R R/primingWeights.R R/Genominator.R R/plotRegion.R R/annotation.R
Genominator documentation built on Nov. 17, 2017, 1:14 p.m.