gtoxMakeAeidPlts: Create a .pdf with dose-response plots

In GladiaTOX: R Package for Processing High Content Screening data

Description

gtoxMakeAeidPlts creates a .pdf file with the dose-response plots for the given aeid.

Usage

gtoxMakeAeidPlts(aeid, lvl = 4L, fname = NULL, odir = getwd(),
ordr.fitc = TRUE, clib = NULL)

Arguments

aeid	Integer of length 1, the assay endpoint id
lvl	Integer of lengh 1, the data level to use (4-6)
fname	Character, the filename
odir	The directory to save the .pdf file in
ordr.fitc	Logical, should the fits be ordered by fit category?
clib	Character, the chemical library to subset on, see gtoxLoadClib for more information.

Details

gtoxMakeAeidPlts provides a wrapper for gtoxPlotFits, allowing the user to produce PDFs with the curve plots without having to separately load all of the data and establish the PDF device.

If 'fname' is NULL, a default name is given by concatenating together assay information.

Note, the default value for ordr.fitc is TRUE in gtoxMakeAeidPlts, but FALSE in gtoxPlotFits

Value

None

Examples

## Save Aeid plot in a pdf file
gtoxMakeAeidPlts(aeid = 10, lvl = 6, ordr.fitc = FALSE)

GladiaTOX documentation built on Nov. 15, 2020, 2:07 a.m.