Man pages for HELP
Tools for HELP data analysis
| base.stacking.thermodynamics | Base-stacking thermodynamic parameters |
| calcGC | Calculate GC percent |
| calcGC-methods | Calculate GC percent (methods) |
| calcPrototype | Calculate prototype |
| calcPrototype-methods | Calculate prototype (methods) |
| calcTm | Calculate Tm |
| calcTm-methods | Calculate Tm (methods) |
| combineData | Combine data |
| combineData-methods | Combine data (methods) |
| createWiggle | Create wiggle track |
| createWiggle-methods | Create wiggle track (methods) |
| exprs2 | Retrieve microarray data (for signal channel 2) from... |
| exprs2-methods | Retrieve microarray data (for signal channel 2) from... |
| fuzzyMatches | Fuzzy matching |
| fuzzyMatches-methods | Fuzzy matching (methods) |
| getFeatures | Get features (methods) |
| getFeatures-methods | Get features (methods) |
| getSamples | Get samples |
| getSamples-methods | Get samples (methods) |
| plotBins | Plot bins |
| plotBins-methods | Plot bins (methods) |
| plotChip | Plot chip image |
| plotChip-methods | Plot chip image (methods) |
| plotFeature | Plot feature versus two-color intensity |
| plotFeature-methods | Plot feature versus two-color intensity (methods) |
| plotPairs | Plot tree-pairs |
| plotPairs-methods | Plot tree-pairs (methods) |
| quantileNormalize | Quantile normalization |
| quantileNormalize-methods | Quantile normalization (methods) |
| readDesign | Read NimbleGen design files |
| readDesign-methods | Read NimbleGen design files (methods) |
| readPairs | Read Nimblegen .pair files |
| readPairs-methods | Read Nimblegen .pair files (methods) |
| readSampleKey | Read sample key |
