shiftBetas: Shift beta values from 0 and 1 to avoid infinite M values
In Harman: The removal of batch effects from datasets using a PCA and constrained optimisation based technique
Description
Usage
Arguments
Value
Examples
Description
A convienance function for methylation data.
Usage
1
shiftBetas(betas, shiftBy = 1e-04)
Arguments
betas
matrix, beta values.
shiftBy
numeric, the amount to shift values of 0 and
1 by.
Value
None
Examples
1
2
3
4
5
betas <- seq(0, 1, by=0.05)
range(betas)
newBetas <- shiftBetas(betas, shiftBy=1e-4)
newBetas
range(newBetas)
Harman documentation built on Nov. 8, 2020, 7:50 p.m.
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Description Usage Arguments Value Examples
Description
A convienance function for methylation data.
Usage
1 | shiftBetas(betas, shiftBy = 1e-04)
|
Arguments
betas |
matrix, beta values. |
shiftBy |
numeric, the amount to shift values of |
Value
None
Examples
1 2 3 4 5 | betas <- seq(0, 1, by=0.05)
range(betas)
newBetas <- shiftBetas(betas, shiftBy=1e-4)
newBetas
range(newBetas)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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