Imetagene: A graphical interface for the metagene package
Version 1.6.0

This package provide a graphical user interface to the metagene package. This will allow people with minimal R experience to easily complete metagene analysis.

Browse man pages Browse package API and functions Browse package files

AuthorAudrey Lemacon <audrey.lemacon.1@ulaval.ca>, Charles Joly Beauparlant <charles.joly-beauparlant@crchul.ulaval.ca>, Arnaud Droit <arnaud.droit@crchuq.ulaval.ca>
Bioconductor views Alignment ChIPSeq Coverage Genetics MultipleComparison Sequencing
Date of publicationNone
MaintainerAudrey Lemacon <audrey.lemacon.1@ulaval.ca>
LicenseArtistic-2.0 | file LICENSE
Version1.6.0
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("Imetagene")

Man pages

shiny_metagene: Launch interactive metagene session

Functions

shiny_metagene Man page Source code

Files

DESCRIPTION
LICENSE
NAMESPACE
NEWS
R
R/shiny_metagene.R
build
build/vignette.rds
inst
inst/doc
inst/doc/imetagene.R
inst/doc/imetagene.Rmd
inst/doc/imetagene.html
inst/extdata
inst/extdata/align1_rep1.bam
inst/extdata/align1_rep1.bam.bai
inst/extdata/align1_rep2.bam
inst/extdata/align1_rep2.bam.bai
inst/extdata/align2_rep1.bam
inst/extdata/align2_rep1.bam.bai
inst/extdata/align2_rep2.bam
inst/extdata/align2_rep2.bam.bai
inst/extdata/ctrl.bam
inst/extdata/ctrl.bam.bai
inst/extdata/design.txt
inst/extdata/list1.bed
inst/extdata/list1.txt
inst/extdata/list2.bed
inst/extdata/list2.txt
inst/extdata/mg_with_design_matrice.Rda
inst/shiny
inst/shiny/Imetagene
inst/shiny/Imetagene/Rplots.pdf
inst/shiny/Imetagene/helper.R
inst/shiny/Imetagene/server.R
inst/shiny/Imetagene/ui.R
man
man/shiny_metagene.Rd
vignettes
vignettes/figures
vignettes/figures/design1.png
vignettes/figures/design2.png
vignettes/figures/design3.png
vignettes/figures/input1.png
vignettes/figures/input2.png
vignettes/figures/matrix1.png
vignettes/figures/matrix2.png
vignettes/figures/plot1.png
vignettes/figures/plot2.png
vignettes/imetagene.Rmd
Imetagene documentation built on May 20, 2017, 10:24 p.m.