findCorFromLoops: Function to perfrom correlation analysis via loops.
In InTAD: Search for correlation between epigenetic signals and gene expression in TADs

This function combines genes and signals using obtained loop connections.

1	findCorFromLoops(object, method = "pearson", adj.pval = FALSE)

`object`	InTADSig object with signals and genes combined via loops
`method`	Correlation method: "pearson" (default), "kendall", "spearman"
`adj.pval`	Perform p-value adjsutment and include q-values in result

A table with correlation values for signal-gene pairs including correlation p-value and euclidian distance.

InTAD documentation built on Nov. 8, 2020, 7:47 p.m.

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