InterMineR-package: R Interface with InterMine-powered databases

Description Details Author(s) References

Description

InterMine-powered databases such as FlyMine, modENCODE, RatMine, YeastMine, HumanMine and TargetMine are integrated databases of genomic, expression and protein data for various organisms. Integrating data makes it possible to run sophisticated data mining queries that span domains of biological knowledge. This R package provides interface with these databases through webservices. It makes most from the correspondence of the data frame object in R and the table object in databases while hiding the details of data exchange through XML or JSON.

Details

Package: InterMineR
Type: Package
Version: 0.99.4
Date: 2016-01-05
License: LGPL
Depends: Biostrings, RCurl, XML, RJSONIO, sqldf, igraph
Suggests: Gviz

Author(s)

InterMine Team

Maintainer: InterMine Team <[email protected]>

References

http://intermine.readthedocs.org/en/latest/web-services/


InterMineR documentation built on Dec. 7, 2018, 6 p.m.