Summarize the information about the constraints contained by an object of the class InterMineR.
an object of the class InterMineR.
additional arguments affecting the summary produced.
a data.frame containing the constraints of the InterMineR object as rows. Each constraint is constituted by a path, an operator and one or more values. Multiple values are returned as a comma-separated character string.
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# get FlyMine instance im.fly = initInterMine(listMines()["FlyMine"]) # get GO_Gene template query qGO_Gene = getTemplateQuery(im.fly, "GO_Gene") # modify GO_Gene template query to have more than one GO values go.constraints = setConstraints( values = list(c("DNA repair", "cellular response to DNA damage stimulus")), modifyQueryConstraints = qGO_Gene, m.index = 3 ) # create 'InterMineR' object go.query = setQuery( inheritQuery = qGO_Gene, where = go.constraints ) # get InterMineR constraint summary summary(go.query)
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