This function normalizes a matrix by subtracting the column (sample) mean from each element and adding the grand mean.
A matrix to be normalized
David Rocke and Geun-Cheol Lee
raw.eS <- neweS(sample.mat, vlist)
# glog transform data
trans.eS <- transeS(raw.eS, lambda = 727, alpha = 56)
normed.exprs <- norm(exprs(trans.eS))
Questions? Problems? Suggestions? Tweet to @rdrrHQian@mutexlabs.com.
Please suggest features or report bugs with the GitHub issue tracker.
All documentation is copyright its authors; we didn't write any of that.