scores: Retrieves the scores from a MAIT object

Description Usage Arguments Value Author(s) See Also Examples

Description

Function scores extracts the scores MAIT object

Usage

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scores(object,
       type,...)

Arguments

object

A MAIT-class object

type

If it is set to "none", the peak aggregation models are returned. If it is set to "PCA", the PCA model is returned. If it is set to "PLS", the PCA model is returned.

...

Other input

Value

A numeric matrix containing the scores saved in the MAIT object

Author(s)

Francesc Fernandez, [email protected]

See Also

MAIT-class

Examples

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data(MAIT_sample)
MAIT<-spectralSigFeatures(MAIT,p.adj="fdr",parametric=TRUE)
scores(MAIT)

MAIT<-plotPCA(MAIT,plot3d=FALSE)
scores(MAIT,type="PCA")

MAIT<-plotPLS(MAIT,plot3d=FALSE)
scores(MAIT,type="PLS")

MAIT documentation built on May 31, 2017, 11:38 a.m.