Files in MBASED
Package containing functions for ASE analysis using Meta-analysis Based Allele-Specific Expression Detection
NAMESPACE
DESCRIPTION
build/vignette.rds
R/MBASEDStatsHelperFunctions1s.R
R/MBASEDStatsMainFunctionsExport.R
R/MBASEDStatsMainFunctions1s.R
R/MBASEDBetaBinomialFunctions.R
R/MBASEDStatsMainFunctions2s.R
R/MBASEDUnitTestsFunctions.R
R/MBASEDStatsHelperFunctions2s.R
R/MBASEDPackageStatement.R
vignettes/MBASED.Rnw
man/runMBASED1s1aseID.Rd
man/testNumericDiff.Rd
man/runMBASED1s.Rd
man/MBASEDMetaAnalysis.Rd
man/logLikelihoodCalculator2s.Rd
man/estimateMAF1s.Rd
man/maxLogLikelihoodCalculator1s.Rd
man/testQuantiles.Rd
man/logLikelihoodCalculator1s.Rd
man/MBASEDVectorizedPropDiffTest.Rd
man/MBASED.Rd
man/MBASEDVectorizedMetaprop.Rd
man/FreemanTukeyFunctions.Rd
man/getPFinal.Rd
man/runMBASED2s.Rd
man/generatingBetaBinomialCounts.Rd
man/MBASEDMetaAnalysisGetMeansAndSEs.Rd
man/estimateMAF2s.Rd
man/runMBASED.Rd
man/shiftAndAttenuateProportions.Rd
man/maxLogLikelihoodCalculator2s.Rd
man/runMBASED2s1aseID.Rd
man/betaParametrizationConverters.Rd
man/getSimulationPvalue.Rd
tests/runTests.R
inst/NEWS
inst/doc/MBASED.pdf
inst/doc/MBASED.R
inst/doc/MBASED.Rnw
inst/unitTests/test_MBASED_1s_method.R
inst/unitTests/test_betabinomial_functions.R
inst/unitTests/test_FT_functions.R
inst/unitTests/test_miscellaneous_helper_functions.R
inst/unitTests/test_MBASED_2s_method.R
