MBASED: Package containing functions for ASE analysis using Meta-analysis Based Allele-Specific Expression Detection
Version 1.10.0

The package implements MBASED algorithm for detecting allele-specific gene expression from RNA count data, where allele counts at individual loci (SNVs) are integrated into a gene-specific measure of ASE, and utilizes simulations to appropriately assess the statistical significance of observed ASE.

Getting started

Package details

AuthorOleg Mayba, Houston Gilbert
Bioconductor views GeneExpression Sequencing Transcription
MaintainerOleg Mayba <[email protected]>
Package repositoryView on Bioconductor
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MBASED documentation built on May 31, 2017, 11:24 a.m.