MBCB: MBCB (Model-based Background Correction for Beadarray)

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This package provides a model-based background correction method, which incorporates the negative control beads to pre-process Illumina BeadArray data.

Author
Yang Xie <Yang.Xie@UTSouthwestern.edu>
Date of publication
None
Maintainer
Jeff Allen <Jeffrey.Allen@UTSouthwestern.edu>
License
GPL (>= 2)
Version
1.28.0
URLs

View on Bioconductor

Man pages

bg.mcmc
MBCB - Bayesian Background Correction for Illumina Beadarray
bg.rma
MBCB - Robust Multi-Array Average Background Correction for...
mbcb.correct
MBCB - Model-Based Background Correction for Illumina...
MBCBExpressionData
MBCB - Bayesian Background Correction for Illumina Beadarray
mbcb.gui
MBCB - Model-Based Background Correction for Illumina...
mbcb.main
MBCB - Model-Based Background Correction for Illumina...
mbcb.parseFile
MBCB - Model-Based Background Correction for Illumina...
printMBCBOutput
MBCB - Model-Based Background Correction for Illumina...

Files in this package

MBCB/DESCRIPTION
MBCB/NAMESPACE
MBCB/R
MBCB/R/bg.MBCBNoBead.R
MBCB/R/bg.guiNoBead.R
MBCB/build
MBCB/build/vignette.rds
MBCB/data
MBCB/data/MBCBExpressionData.rda
MBCB/inst
MBCB/inst/doc
MBCB/inst/doc/MBCB.R
MBCB/inst/doc/MBCB.Rnw
MBCB/inst/doc/MBCB.pdf
MBCB/man
MBCB/man/MBCBExpressionData.Rd
MBCB/man/bg.mcmc.Rd
MBCB/man/bg.rma.Rd
MBCB/man/mbcb.correct.Rd
MBCB/man/mbcb.gui.Rd
MBCB/man/mbcb.main.Rd
MBCB/man/mbcb.parseFile.Rd
MBCB/man/printMBCBOutput.Rd
MBCB/vignettes
MBCB/vignettes/MBCB.Rnw