MGFM: Marker Gene Finder in Microarray gene expression data

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The package is designed to detect marker genes from Microarray gene expression data sets

Author
Khadija El Amrani
Date of publication
None
Maintainer
Khadija El Amrani <khadija.el-amrani@charite.de>
License
GPL-3
Version
1.8.0

View on Bioconductor

Man pages

ds2.mat
Microarray gene expression data set
getHtmlpage
Function to build HTML pages to show marker genes
getMarkerGenes
Marker Gene Detection
MGFM-internal
Internal MGFM Functions
MGFM-package
Marker Gene Finder in Microarray gene expression data

Files in this package

MGFM/DESCRIPTION
MGFM/NAMESPACE
MGFM/NEWS
MGFM/R
MGFM/R/getHtmlpage.R
MGFM/R/getMarkerGenes.R
MGFM/R/internal.R
MGFM/build
MGFM/build/vignette.rds
MGFM/data
MGFM/data/datalist
MGFM/data/ds2.mat.rda
MGFM/inst
MGFM/inst/doc
MGFM/inst/doc/MGFM.R
MGFM/inst/doc/MGFM.Rnw
MGFM/inst/doc/MGFM.pdf
MGFM/man
MGFM/man/MGFM-internal.Rd
MGFM/man/MGFM-package.Rd
MGFM/man/ds2.mat.Rd
MGFM/man/getHtmlpage.Rd
MGFM/man/getMarkerGenes.Rd
MGFM/vignettes
MGFM/vignettes/MGFM.Rnw
MGFM/vignettes/fig
MGFM/vignettes/fig/clust_dendrogram1.pdf
MGFM/vignettes/fig/clust_dendrogram2.pdf
MGFM/vignettes/fig/clust_dendrogram2_no_combat_norm.pdf
MGFM/vignettes/references.bib