MMDiff: Statistical Testing for ChIP-Seq data sets

This package detects statistically significant difference between read enrichment profiles in different ChIP-Seq samples. To take advantage of shape differences it uses Kernel methods (Maximum Mean Discrepancy, MMD). WARNING: This package is deprecated, please use MMDiff2 instead.

Package details

AuthorGabriele Schweikert
MaintainerGabriele Schweikert <G.Schweikert@ed.ac.uk>
LicenseArtistic-2.0
Version1.12.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MMDiff")

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MMDiff documentation built on Oct. 5, 2016, 4:28 a.m.