Files in MSstatsTMTPTM

Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling

README.md

NAMESPACE

DESCRIPTION

R/RcppExports.R R/MSstatsTMTPTM.R R/msstatstmtptm-package.R R/dataProcessPlotsTMTPTM.R R/groupComparisonTMTPTM.R R/dataDoc.R R/msstatsptm-package.R

src/RcppExports.cpp

src/model_adjust.cpp

inst/NEWS.Rd

inst/doc/MSstatsTMTPTM.R inst/doc/MSstatsTMTPTM.Workflow.R

inst/doc/MSstatsTMTPTM.html

inst/doc/MSstatsTMTPTM.Workflow.rmd inst/doc/MSstatsTMTPTM.Rmd

inst/doc/MSstatsTMTPTM.Workflow.html

build/vignette.rds

tests/testthat.R tests/testthat/test-groupComparisonTMTPTM.R tests/testthat/test-dataProcessPlotsTMTPTM.R vignettes/MSstatsTMTPTM.Workflow.rmd vignettes/MSstatsTMTPTM.Rmd

data/example.contrast.matrix.rda

data/model.results.contrast.rda

data/model.results.pairwise.rda

data/quant.msstats.protein.rda

data/raw.ptm.rda

data/quant.msstats.ptm.rda

data/raw.protein.rda

man/example.contrast.matrix.Rd man/raw.protein.Rd man/dataProcessPlotsTMTPTM.Rd man/raw.ptm.Rd man/quant.msstats.ptm.Rd man/model.results.contrast.Rd man/groupComparisonTMTPTM.Rd man/model.results.pairwise.Rd man/quant.msstats.protein.Rd man/MSstatsTMTPTM.Rd

MSstatsTMTPTM documentation built on Feb. 18, 2021, 2 a.m.