Man pages for MSstatsTMTPTM
Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling

dataProcessPlotsTMTPTMVisualization for explanatory data analysis - TMT experiment
example.contrast.matrixExample contrast matrix for input into the...
groupComparisonTMTPTMModel PTM and/or protein data and make adjustments if needed
model.results.contrastOuput of groupComparisonTMTPTM for specific comparisons of...
model.results.pairwiseOuput of groupComparisonTMTPTM for full pairwise test
MSstatsTMTPTMMSstatsTMTPTM: A package for detecting differencially...
quant.msstats.proteinExample of output from proteinSummarizaiton function for...
quant.msstats.ptmExample of output from proteinSummarizaiton function for PTM...
raw.proteinExample of input Protein dataset for TMT experiments.
raw.ptmExample of input PTM dataset for TMT experiments.
MSstatsTMTPTM documentation built on Feb. 18, 2021, 2 a.m.