MetCirc: Navigating mass spectral similarity in high-resolution MS/MS metabolomics data
Version 1.6.0

MetCirc comprises a workflow to interactively explore high-resolution MS/MS metabolomics data: create an MSP object, a format for MS/MS library data, bin m/z values of precursors, calculate similarity between precursors based on the normalised dot product and visualise similarities in a circular layout. Within the interactive framework the user can annotate MS/MS features based on their similarity to (known) related MS/MS features.

Package details

AuthorThomas Naake <[email protected]> and Emmanuel Gaquerel <[email protected]>
Bioconductor views MassSpectrometry Metabolomics Visualization
MaintainerThomas Naake <[email protected]>
LicenseGPL-2
Version1.6.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("MetCirc")

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MetCirc documentation built on Nov. 17, 2017, 9:34 a.m.