MetCirc comprises a workflow to interactively explore high-resolution MS/MS metabolomics data. MetCirc uses the Spectrum2 and MSpectra infrastructure defined in the package MSnbase that stores MS/MS spectra. MetCirc offers functionality to calculate similarity between precursors based on the normalised dot product, neutral losses or user-defined functions and visualise similarities in a circular layout. Within the interactive framework the user can annotate MS/MS features based on their similarity to (known) related MS/MS features.
|Author||Thomas Naake <email@example.com>, Johannes Rainer <firstname.lastname@example.org> and Emmanuel Gaquerel <email@example.com>|
|Bioconductor views||ImmunoOncology MassSpectrometry Metabolomics Visualization|
|Maintainer||Thomas Naake <firstname.lastname@example.org>|
|License||GPL (>= 3)|
|Package repository||View on Bioconductor|
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