colorbar.sig: Generates a colour bar for spatial significance plots
In OLIN: Optimized local intensity-dependent normalisation of two-color microarrays
Description
Usage
Arguments
Details
Author(s)
See Also
Description
This function generates a colour bar for the visualisation of significance of spatial bias.
Usage
1
colorbar.sig(color.lim=c(-3,3))
Arguments
color.lim
limits for color bar
Details
The function colorbar.sig produces a colour bar for 2D-plots generated by sigxy.plot.
The colours used range from green (for the lower limit of the colour range)
to red (for its upper limit).
For visualisation, values below or above the limits for the colour range
(as given by color.lim) are set
to the lower or upper limit, respectively. The function colorbar.sig
is similar to more general function colorbar.mxy.
It differs, however, in its axis annotation. Since it is used to present the significance
in a log10-scale, annotation of axis tacks consists of negative values in both direction.
Author(s)
Matthias E. Futschik (http://itb.biologie.hu-berlin.de/~futschik)
See Also
OLIN documentation built on Nov. 8, 2020, 7:44 p.m.
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Description Usage Arguments Details Author(s) See Also
Description
This function generates a colour bar for the visualisation of significance of spatial bias.
Usage
1 | colorbar.sig(color.lim=c(-3,3))
|
Arguments
color.lim |
limits for color bar |
Details
The function colorbar.sig produces a colour bar for 2D-plots generated by sigxy.plot.
The colours used range from green (for the lower limit of the colour range)
to red (for its upper limit).
For visualisation, values below or above the limits for the colour range
(as given by color.lim) are set
to the lower or upper limit, respectively. The function colorbar.sig
is similar to more general function colorbar.mxy.
It differs, however, in its axis annotation. Since it is used to present the significance
in a log10-scale, annotation of axis tacks consists of negative values in both direction.
Author(s)
Matthias E. Futschik (http://itb.biologie.hu-berlin.de/~futschik)
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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