plot_pathways: Plot Rugplots for Selected Pathways

Description Usage Arguments Value Examples

View source: R/plot_rugplots.R

Description

Plot Rugplots for Selected Pathways

Usage

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plot_pathways(
  rugplots_data,
  filter_type,
  filter_parameter,
  mode,
  output_directory
)

Arguments

rugplots_data

The data to be plotted (returned from find_pathway_significance())

filter_type

The parameter to be used for filtering

filter_parameter

The cut-off value of the filtering parameter

mode

The mode used to create the data (increasing/decreasing)

output_directory

An existing directory to save results in

Value

Does not return a value

Examples

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example("find_pathway_significance")
plot_pathways(rugplots_data, "pvalue", "0.03", "decreasing", tempdir())

PAST documentation built on Nov. 8, 2020, 8:31 p.m.