Man pages for PGA
An package for identification of novel peptides by customized database derived from RNA-Seq

addGeneName4EnsemblAdd gene nemes
buildFusionProteinDBCreate customized protein database from fusion events
createProDB4DenovoRNASeqCreate protein database based on the transcripts from de novo...
dbCreatorCreate customized protein database from RNA-Seq data
easyRuneasyRun
parserGearPost-processing for the identification result
PrepareAnnotationEnsembl2Prepare annotation from ENSEMBL
PrepareAnnotationRefseq2Prepare annotation from Refseq
reportGearThe main function for report generation
runTandemrun X!Tandem
PGA documentation built on Nov. 8, 2020, 6:20 p.m.