API for R4RNA
An R package for RNA visualization and analysis
| Global functions | |
|---|---|
| R4RNA | Man page |
| R4RNA-package | Man page |
| alignmentCanonical | Man page Source code |
| alignmentConservation | Man page Source code |
| alignmentCovariation | Man page Source code |
| alignmentPercentGaps | Man page Source code |
| as.helix | Man page Source code |
| baseConservation | Man page Source code |
| basepairCanonical | Man page Source code |
| basepairConservation | Man page Source code |
| basepairCovariation | Man page Source code |
| basepairFrequency | Man page Source code |
| blankPlot | Man page Source code |
| collapseHelix | Man page Source code |
| colourBy.internal | Source code |
| colourByBasepairFrequency | Man page Source code |
| colourByCanonical | Man page Source code |
| colourByConservation | Man page Source code |
| colourByCount | Man page Source code |
| colourByCovariation | Man page Source code |
| colourByUnknottedGroups | Man page Source code |
| colourByValue | Man page Source code |
| columnPercentIdentity | Source code |
| defaultPalette | Man page Source code |
| emptyHelix | Source code |
| expandHelix | Man page Source code |
| expandNumberedHelix | Source code |
| fasta | Man page |
| getBaseColours | Source code |
| getCovarianceColours | Source code |
| getSequenceColour | Source code |
| hamming | Source code |
| helix | Man page |
| helixCanonical | Man page Source code |
| helixConservation | Man page Source code |
| helixCovariation | Man page Source code |
| helixToBpseq | Man page Source code |
| helixToConnect | Man page Source code |
| helixToVienna | Man page Source code |
| is.helix | Man page Source code |
| isConflictingHelix | Man page Source code |
| isDuplicatingHelix | Man page Source code |
| isOverlappingHelix | Man page Source code |
| isValidBp | Source code |
| is_pseudoknotted | Source code |
| known | Man page |
| logceiling | Man page Source code |
| logfloor | Man page Source code |
| logseq | Man page Source code |
| maxHeight | Man page Source code |
| openFileOrConnection | Source code |
| parseBracket | Man page |
| plotArc | Man page Source code |
| plotArcs | Man page Source code |
| plotArrow | Source code |
| plotCovariance | Man page Source code |
| plotCovarianceGrid | Source code |
| plotCovarianceLine | Source code |
| plotCovarianceSpecies | Source code |
| plotCovarianceText | Source code |
| plotDoubleCovariance | Man page Source code |
| plotDoubleHelix | Man page Source code |
| plotHelix | Man page Source code |
| plotOverlapCovariance | Man page Source code |
| plotOverlapHelix | Man page Source code |
| plotScale | Source code |
| readBpseq | Man page Source code |
| readConnect | Man page Source code |
| readHelix | Man page Source code |
| readVienna | Man page Source code |
| structureMismatchScore | Man page Source code |
| structureMismatchScoreInternal | Source code |
| unknottedGroups | Man page Source code |
| viennaToHelix | Man page Source code |
| writeHelix | Man page Source code |
